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blockCV introduction: how to create block cross-validation folds 15 days ago
Introduction | Installation | Package data | Block cross-validation strategies | Spatial blocks | Spatial and environmental clustering | Leave-group-out cross-validation | Buffering LOO (also known as Spatial LOO) | Nearest Neighbour Distance Matching (NNDM) LOO | k-fold Nearest Neighbour Distance Matching (kNNDM) | Visualising the folds | Next steps | References:
Choosing and diagnosing spatial folds 16 days ago
Introduction | Prepare data and folds | Fold-quality summary | Environmental similarity diagnostics | Nearest-neighbour distance diagnostics | Choosing a candidate block size | References:
Block cross-validation for species distribution modelling 16 days ago
Introduction | Reading and plotting data | Generating block CV folds | Evaluating SDMs with block cross-validation: examples | Using blockCV with Random Forest model | Using blockCV in biomod2 package | References:
Using blockCV with caret 16 days ago
Introduction | Prepare the data | Create spatial folds | Fit a caret model | References
Data Visualisation for disdat data3 months ago
Correlation matrix | Density plots | Nearest-neighbour distance | Mapping species data | Plotting static map | Plotting interactive map
Modeling NCEAS data3 months ago
Introduction | Modeling all species with one modeling method - example | Evaluating the models | Creating target group background (TGB) sample | TGB example | References
Species Distribution Response Curves3 months ago
Prepare the training data | Fit a down-sampled random forest | Plot univariate and bivariate response curves | Ensemble response curves